Stem-loop oni-mir-10671

Accession

MI0035190

Description

Oreochromis niloticus oni-mir-10671 precursor miRNA

Sequence

279 reads, 1.0 reads per million, 40 experiments

UCCCUGACACACAGCUCUGCAGUcucacaaacUGCAGUCUGCCUGUCAGGUAGU
..(((((((..(((..(((((((.......))))))).)))..)))))))....

Structure

--UC       CA   CU       cu 
    CCUGACA  CAG  CUGCAGU  c
    |||||||  |||  |||||||  a
    GGACUGU  GUC  GACGUca  c
UGAU       CC   -U       aa 

Annotation confidence High

Genome context

GL831436.1: 310083-310136 [+]

Mature oni-miR-10671-5p

• Accession: MIMAT0043167
• Description: Oreochromis niloticus oni-miR-10671-5p mature miRNA
• Sequence: 1 - UCCCUGACACACAGCUCUGCAGU - 23
• Evidence: experimental ; Illumina [1]

Mature oni-miR-10671-3p

• Accession: MIMAT0059621
• Description: Oreochromis niloticus oni-miR-10671-3p mature miRNA
• Sequence: 33 - UGCAGUCUGCCUGUCAGGUAGU - 54
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25199625
   Identification of male-specific amh duplication, sexually differentially expressed genes and microRNAs at early embryonic development of Nile tilapia (Oreochromis niloticus)
   Eshel O, Shirak A, Dor L, Band M, Zak T, Markovich-Gordon M, Chalifa-Caspi V, Feldmesser E, Weller JI, Seroussi E, Hulata G, Ron M
   BMC Genomics (2014) 15:774