Stem-loop oni-mir-10672

Accession

MI0035191

Description

Oreochromis niloticus oni-mir-10672 precursor miRNA

Sequence

928 reads, 2.0 reads per million, 43 experiments

ACAGAGUCCUGACCUCAACCCgacagaacaccuuuggGAUGAAUCGGAGACUCUGAGCC
.(((((((((((..(((.(((((.((.....))))))).))).)))).)))))))....

Structure

---A       -    CC   A     c  a 
    CAGAGUC CUGA  UCA CCCga ag a
    ||||||| ||||  ||| ||||| || c
    GUCUCAG GGCU  AGU Ggguu uc a
CCGA       A    -A   A     -  c 

Annotation confidence High

Genome context

GL831254.1: 1220258-1220316 [-]

Mature oni-miR-10672-5p

• Accession: MIMAT0059622
• Description: Oreochromis niloticus oni-miR-10672-5p mature miRNA
• Sequence: 1 - ACAGAGUCCUGACCUCAACCC - 21
• Evidence: experimental ; Illumina [1]

Mature oni-miR-10672-3p

• Accession: MIMAT0043168
• Description: Oreochromis niloticus oni-miR-10672-3p mature miRNA
• Sequence: 38 - GAUGAAUCGGAGACUCUGAGCC - 59
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25199625
   Identification of male-specific amh duplication, sexually differentially expressed genes and microRNAs at early embryonic development of Nile tilapia (Oreochromis niloticus)
   Eshel O, Shirak A, Dor L, Band M, Zak T, Markovich-Gordon M, Chalifa-Caspi V, Feldmesser E, Weller JI, Seroussi E, Hulata G, Ron M
   BMC Genomics (2014) 15:774