miRBase entry: oni-mir-10676

Stem-loop oni-mir-10676

Accession

MI0035196

Description

Oreochromis niloticus oni-mir-10676 precursor miRNA

Sequence

ccccauuguuguguuguguuugugucacauacaaaUGACAUCACAGGACAUCCGGGCC
.(((...(.(((.(((((...((((((........))))))))))).))).).)))..

Structure

-c   auu u   g     uuu      cau 
  ccc   g ugu uugug   guguca   a
  |||   | ||| |||||   ||||||    
  GGG   C ACA GACAC   UACAGU   c
CC   --C U   G     ---      aaa

Annotation confidence Not enough data

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Genome context

GL831414.1: 210524-210581 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from oni-mir-10676

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature oni-miR-10676

Accession	MIMAT0043173
Description	Oreochromis niloticus oni-miR-10676 mature miRNA
Sequence	36 - UGACAUCACAGGACAUCCGGGCC - 58
Evidence	experimental Illumina [1]

References

PubMed ID: 25199625
Identification of male-specific amh duplication, sexually differentially expressed genes and microRNAs at early embryonic development of Nile tilapia (Oreochromis niloticus)
Eshel O, Shirak A, Dor L, Band M, Zak T, Markovich-Gordon M, Chalifa-Caspi V, Feldmesser E, Weller JI, Seroussi E, Hulata G, Ron M
BMC Genomics (2014) 15:774