Stem-loop oni-mir-10678

Accession

MI0035198

Description

Oreochromis niloticus oni-mir-10678 precursor miRNA

Sequence

143 reads, 0.0 reads per million, 57 experiments

UUCAAAGUAAAAGCUGUGCCUcaacacauuugaaaaggUGCAGCUGUUACUCUGAAGGUGA
((((.(((((.(((((((((((((.....))))...))))))))).))))).)))).....

Structure

-----    A     A         ---    c 
     UUCA AGUAA AGCUGUGCC   Ucaa a
     |||| ||||| |||||||||   |||| c
     AAGU UCAUU UCGACGUgg   aguu a
AGUGG    C     G         aaa    u 

Annotation confidence Medium

Genome context

GL831502.1: 348545-348605 [+]

Mature oni-miR-10678-5p

• Accession: MIMAT0043175
• Description: Oreochromis niloticus oni-miR-10678-5p mature miRNA
• Sequence: 1 - UUCAAAGUAAAAGCUGUGCCU - 21
• Evidence: experimental ; Illumina [1]

Mature oni-miR-10678-3p

• Accession: MIMAT0059625
• Description: Oreochromis niloticus oni-miR-10678-3p mature miRNA
• Sequence: 39 - UGCAGCUGUUACUCUGAAGGUGA - 61
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25199625
   Identification of male-specific amh duplication, sexually differentially expressed genes and microRNAs at early embryonic development of Nile tilapia (Oreochromis niloticus)
   Eshel O, Shirak A, Dor L, Band M, Zak T, Markovich-Gordon M, Chalifa-Caspi V, Feldmesser E, Weller JI, Seroussi E, Hulata G, Ron M
   BMC Genomics (2014) 15:774