Stem-loop oni-mir-10679

Accession

MI0035199

Description

Oreochromis niloticus oni-mir-10679 precursor miRNA

Sequence

688 reads, 1.0 reads per million, 71 experiments

AUGACCGAUGUCUGUGUGACGaacuuugcagacacguCCAACACGUUCAUCUGUCUCCG
..(((.((((..(((((((((.............))))..)))))..)))).)))....

Structure

--AU   C    UC     --    aacuu 
    GAC GAUG  UGUGU  GACG     u
    ||| ||||  |||||  ||||     g
    CUG CUAC  GCACA  Cugc     c
GCCU   U    UU     AC    acaga 

Annotation confidence Medium

Genome context

CM001459.1: 2262736-2262794 [-]

Mature oni-miR-10679-5p

• Accession: MIMAT0043176
• Description: Oreochromis niloticus oni-miR-10679-5p mature miRNA
• Sequence: 1 - AUGACCGAUGUCUGUGUGACG - 21
• Evidence: experimental ; Illumina [1]

Mature oni-miR-10679-3p

• Accession: MIMAT0059626
• Description: Oreochromis niloticus oni-miR-10679-3p mature miRNA
• Sequence: 38 - CCAACACGUUCAUCUGUCUCCG - 59
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25199625
   Identification of male-specific amh duplication, sexually differentially expressed genes and microRNAs at early embryonic development of Nile tilapia (Oreochromis niloticus)
   Eshel O, Shirak A, Dor L, Band M, Zak T, Markovich-Gordon M, Chalifa-Caspi V, Feldmesser E, Weller JI, Seroussi E, Hulata G, Ron M
   BMC Genomics (2014) 15:774