Stem-loop oni-mir-10685

Accession

MI0035207

Description

Oreochromis niloticus oni-mir-10685 precursor miRNA

Sequence

309 reads, 1.0 reads per million, 76 experiments

AGCUACAUGUCAACUGAUUUGAUuaugacuuuguggacAGACCAGUUGAUGUUCAGCUG
((((..((((((((((.((((.((((......)))).)))).))))))))))..)))).

Structure

-    AC          A    A    ga 
 AGCU  AUGUCAACUG UUUG Uuau  c
 ||||  |||||||||| |||| ||||   
 UCGA  UGUAGUUGAC AGAc ggug  u
G    CU          C    a    uu 

Annotation confidence High

Genome context

CM001447.1: 21845252-21845310 [+]

Mature oni-miR-10685-5p

• Accession: MIMAT0059630
• Description: Oreochromis niloticus oni-miR-10685-5p mature miRNA
• Sequence: 1 - AGCUACAUGUCAACUGAUUUGAU - 23
• Evidence: experimental ; Illumina [1]

Mature oni-miR-10685-3p

• Accession: MIMAT0043184
• Description: Oreochromis niloticus oni-miR-10685-3p mature miRNA
• Sequence: 39 - AGACCAGUUGAUGUUCAGCUG - 59
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25199625
   Identification of male-specific amh duplication, sexually differentially expressed genes and microRNAs at early embryonic development of Nile tilapia (Oreochromis niloticus)
   Eshel O, Shirak A, Dor L, Band M, Zak T, Markovich-Gordon M, Chalifa-Caspi V, Feldmesser E, Weller JI, Seroussi E, Hulata G, Ron M
   BMC Genomics (2014) 15:774