Stem-loop oni-mir-10686-2

Accession

MI0035209

Description

Oreochromis niloticus oni-mir-10686-2 precursor miRNA

Sequence

676 reads, 1.0 reads per million, 73 experiments

AUUGCGCAGACCUGUCCGAGAggguucuauaucccucUCGGACAGGUCUGCGCAAUGCA
((((((((((((((((((((((((........))))))))))))))))))))))))...

Structure

---                        uuc 
   AUUGCGCAGACCUGUCCGAGAggg   u
   ||||||||||||||||||||||||    
   UAACGCGUCUGGACAGGCUcuccc   a
ACG                        uau 

Annotation confidence High

Genome context

CM001464.1: 14763952-14764010 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from oni-mir-10686-2

Mature oni-miR-10686-5p

• Accession: MIMAT0059631
• Description: Oreochromis niloticus oni-miR-10686-5p mature miRNA
• Sequence: 1 - AUUGCGCAGACCUGUCCGAGA - 21
• Evidence: experimental ; Illumina [1]

Mature oni-miR-10686-3p

• Accession: MIMAT0043185
• Description: Oreochromis niloticus oni-miR-10686-3p mature miRNA
• Sequence: 38 - UCGGACAGGUCUGCGCAAUGCA - 59
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25199625
   Identification of male-specific amh duplication, sexually differentially expressed genes and microRNAs at early embryonic development of Nile tilapia (Oreochromis niloticus)
   Eshel O, Shirak A, Dor L, Band M, Zak T, Markovich-Gordon M, Chalifa-Caspi V, Feldmesser E, Weller JI, Seroussi E, Hulata G, Ron M
   BMC Genomics (2014) 15:774