Stem-loop oni-mir-10688

Accession

MI0035211

Description

Oreochromis niloticus oni-mir-10688 precursor miRNA

Sequence

312 reads, 5.0 reads per million, 70 experiments

UAGGCCCGCAGAUCUGAUGAUaugauuacaaauuugaUCAUCGACCUGCAGCCUAGGC
(((((..((((.((.((((((..((((...))))..)))))))).)))).)))))...

Structure

---     CC    A  U      au    a 
   UAGGC  GCAG UC GAUGAU  gauu  
   |||||  |||| || ||||||  |||| c
   AUCCG  CGUC AG CUACUa  uuaa  
CGG     -A    C  -      gu    a 

Annotation confidence High

Genome context

CM001450.1: 44041898-44041955 [-]

Mature oni-miR-10688-5p

• Accession: MIMAT0043187
• Description: Oreochromis niloticus oni-miR-10688-5p mature miRNA
• Sequence: 1 - UAGGCCCGCAGAUCUGAUGAU - 21
• Evidence: experimental ; Illumina [1]

Mature oni-miR-10688-3p

• Accession: MIMAT0059633
• Description: Oreochromis niloticus oni-miR-10688-3p mature miRNA
• Sequence: 38 - UCAUCGACCUGCAGCCUAGGC - 58
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25199625
   Identification of male-specific amh duplication, sexually differentially expressed genes and microRNAs at early embryonic development of Nile tilapia (Oreochromis niloticus)
   Eshel O, Shirak A, Dor L, Band M, Zak T, Markovich-Gordon M, Chalifa-Caspi V, Feldmesser E, Weller JI, Seroussi E, Hulata G, Ron M
   BMC Genomics (2014) 15:774