Stem-loop oni-mir-10689

Accession

MI0035213

Description

Oreochromis niloticus oni-mir-10689 precursor miRNA

Sequence

1484 reads, 3.0 reads per million, 74 experiments

AAUCACGACAUUGUAAGAUGCUgugauugcaucuuacagCAUCUUACAAAGCUGUGACUGC
..(((((.(.((((((((((((((((.......)))))))))))))))).).)))))....

Structure

--AA     A A                uu 
    UCACG C UUGUAAGAUGCUguga  g
    ||||| | ||||||||||||||||  c
    AGUGU G AACAUUCUACgacauu  a
CGUC     C A                cu 

Annotation confidence High

Genome context

GL831636.1: 74801-74861 [-]

Mature oni-miR-10689-5p

• Accession: MIMAT0043189
• Description: Oreochromis niloticus oni-miR-10689-5p mature miRNA
• Sequence: 1 - AAUCACGACAUUGUAAGAUGCU - 22
• Evidence: experimental ; Illumina [1]

Mature oni-miR-10689-3p

• Accession: MIMAT0059635
• Description: Oreochromis niloticus oni-miR-10689-3p mature miRNA
• Sequence: 40 - CAUCUUACAAAGCUGUGACUGC - 61
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25199625
   Identification of male-specific amh duplication, sexually differentially expressed genes and microRNAs at early embryonic development of Nile tilapia (Oreochromis niloticus)
   Eshel O, Shirak A, Dor L, Band M, Zak T, Markovich-Gordon M, Chalifa-Caspi V, Feldmesser E, Weller JI, Seroussi E, Hulata G, Ron M
   BMC Genomics (2014) 15:774