Stem-loop oni-mir-10690

Accession

MI0035214

Description

Oreochromis niloticus oni-mir-10690 precursor miRNA

Sequence

415 reads, 1.0 reads per million, 68 experiments

CGUGACUUGAGUAUGGGCAUGCAguuuggaaagaaaaugCAUCCACAUCUCAAGCUAUUGA
.(((.((((((.(((((.(((((.(((......))).))))))).))))))))).)))...

Structure

--C   A      U   -  C     g   gg 
   GUG CUUGAG AUG GG AUGCA uuu  a
   ||| |||||| ||| || ||||| |||   
   UAU GAACUC UAC CC UACgu aaa  a
AGU   C      -   A  -     a   ga 

Annotation confidence High

Genome context

CM001464.1: 14103956-14104016 [-]

Mature oni-miR-10690-5p

• Accession: MIMAT0043190
• Description: Oreochromis niloticus oni-miR-10690-5p mature miRNA
• Sequence: 1 - CGUGACUUGAGUAUGGGCAUGCA - 23
• Evidence: experimental ; Illumina [1]

Mature oni-miR-10690-3p

• Accession: MIMAT0059636
• Description: Oreochromis niloticus oni-miR-10690-3p mature miRNA
• Sequence: 40 - CAUCCACAUCUCAAGCUAUUGA - 61
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25199625
   Identification of male-specific amh duplication, sexually differentially expressed genes and microRNAs at early embryonic development of Nile tilapia (Oreochromis niloticus)
   Eshel O, Shirak A, Dor L, Band M, Zak T, Markovich-Gordon M, Chalifa-Caspi V, Feldmesser E, Weller JI, Seroussi E, Hulata G, Ron M
   BMC Genomics (2014) 15:774