Stem-loop oni-mir-10692-2

Accession

MI0035217

Description

Oreochromis niloticus oni-mir-10692-2 precursor miRNA

Sequence

210 reads, 1.0 reads per million, 67 experiments

ACAGACAAAUAAGAGUGACAUUUacuuauuuacauaaguaaaUGUCACUCUUAUUUGUCUGUGC
(((((((((((((((((((((((((((((....)))))))))))))))))))))))))))))..

Structure

--                             u 
  ACAGACAAAUAAGAGUGACAUUUacuuau u
  |||||||||||||||||||||||||||||  
  UGUCUGUUUAUUCUCACUGUaaaugaaua a
CG                             c 

Annotation confidence High

Genome context

CM001448.1: 27232470-27232533 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from oni-mir-10692-2

Mature oni-miR-10692-5p

• Accession: MIMAT0059638
• Description: Oreochromis niloticus oni-miR-10692-5p mature miRNA
• Sequence: 1 - ACAGACAAAUAAGAGUGACAUUU - 23
• Evidence: experimental ; Illumina [1]

Mature oni-miR-10692-3p

• Accession: MIMAT0043192
• Description: Oreochromis niloticus oni-miR-10692-3p mature miRNA
• Sequence: 43 - UGUCACUCUUAUUUGUCUGUGC - 64
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25199625
   Identification of male-specific amh duplication, sexually differentially expressed genes and microRNAs at early embryonic development of Nile tilapia (Oreochromis niloticus)
   Eshel O, Shirak A, Dor L, Band M, Zak T, Markovich-Gordon M, Chalifa-Caspi V, Feldmesser E, Weller JI, Seroussi E, Hulata G, Ron M
   BMC Genomics (2014) 15:774