Stem-loop oni-mir-10694

Accession

MI0035220

Description

Oreochromis niloticus oni-mir-10694 precursor miRNA

Sequence

363 reads, 14.0 reads per million, 26 experiments

UUGCAAUAGAAUUCGUCCGACAAGGagugugugugugauugucuguccuaccguacuacUUGUACAGUAGAGGAUUGUAGU
(((((((.....((.....(((((.((((((.(((.(((.....))).))))))))).)))))......))..))))))).

Structure

-       AGAAU  -GUCCG     G      u   u   u 
 UUGCAAU     UC      ACAAG agugug gug gau g
 |||||||     ||      ||||| |||||| ||| ||| u
 GAUGUUA     AG      UGUUc ucaugc cau cug c
U       ---GG  AUGACA     a      -   c   u 

Annotation confidence Medium

Genome context

CM001447.1: 18331730-18331810 [-]

Mature oni-miR-10694-5p

• Accession: MIMAT0043195
• Description: Oreochromis niloticus oni-miR-10694-5p mature miRNA
• Sequence: 1 - UUGCAAUAGAAUUCGUCCGACAAGG - 25
• Evidence: experimental ; Illumina [1]

Mature oni-miR-10694-3p

• Accession: MIMAT0059640
• Description: Oreochromis niloticus oni-miR-10694-3p mature miRNA
• Sequence: 60 - UUGUACAGUAGAGGAUUGUAGU - 81
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25199625
   Identification of male-specific amh duplication, sexually differentially expressed genes and microRNAs at early embryonic development of Nile tilapia (Oreochromis niloticus)
   Eshel O, Shirak A, Dor L, Band M, Zak T, Markovich-Gordon M, Chalifa-Caspi V, Feldmesser E, Weller JI, Seroussi E, Hulata G, Ron M
   BMC Genomics (2014) 15:774