Stem-loop oni-mir-10697a-1

Accession

MI0035223

Description

Oreochromis niloticus oni-mir-10697a-1 precursor miRNA

Sequence

3367 reads, 12.0 reads per million, 74 experiments

GGUGGCCUCAGAAUCUCAUgucaucuuuucacagaugAUGGGGUUCUGUUGGCUUCAUC
.(.((((.((((((((((..((((((......))))))))))))))))..)))).)...

Structure

--G U    -U          Ug      uu 
   G GGCC  CAGAAUCUCA  ucaucu  u
   | ||||  ||||||||||  ||||||   
   C UCGG  GUCUUGGGGU  Aguaga  c
CUA U    UU          --      ca 

Annotation confidence High

Genome context

CM001461.1: 1825830-1825888 [+]

Mature oni-miR-10697a-1-5p

• Accession: MIMAT0059641
• Description: Oreochromis niloticus oni-miR-10697a-1-5p mature miRNA
• Sequence: 1 - GGUGGCCUCAGAAUCUCAU - 19
• Evidence: experimental ; Illumina [1]

Mature oni-miR-10697a-3p

• Accession: MIMAT0043198
• Description: Oreochromis niloticus oni-miR-10697a-3p mature miRNA
• Sequence: 38 - AUGGGGUUCUGUUGGCUUCAUC - 59
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25199625
   Identification of male-specific amh duplication, sexually differentially expressed genes and microRNAs at early embryonic development of Nile tilapia (Oreochromis niloticus)
   Eshel O, Shirak A, Dor L, Band M, Zak T, Markovich-Gordon M, Chalifa-Caspi V, Feldmesser E, Weller JI, Seroussi E, Hulata G, Ron M
   BMC Genomics (2014) 15:774