Stem-loop oni-mir-10700

Accession

MI0035226

Description

Oreochromis niloticus oni-mir-10700 precursor miRNA

Sequence

563 reads, 1.0 reads per million, 69 experiments

UUCGUUAGUGCAGAAGACAGACUgcgucucagacgUCGGGUCGUUUGCAUAGCGAGG
(((((((.((((((.(((...(((((((...)))).)))))).))))))))))))).

Structure

-       G      A   AGA   -    u 
 UUCGUUA UGCAGA GAC   CUg cguc  
 ||||||| |||||| |||   ||| |||| c
 GAGCGAU ACGUUU CUG   GGC gcag  
G       -      G   ---   U    a 

Annotation confidence High

Genome context

CM001456.1: 6817548-6817604 [+]

Mature oni-miR-10700-5p

• Accession: MIMAT0043201
• Description: Oreochromis niloticus oni-miR-10700-5p mature miRNA
• Sequence: 1 - UUCGUUAGUGCAGAAGACAGACU - 23
• Evidence: experimental ; Illumina [1]

Mature oni-miR-10700-3p

• Accession: MIMAT0059643
• Description: Oreochromis niloticus oni-miR-10700-3p mature miRNA
• Sequence: 36 - UCGGGUCGUUUGCAUAGCGAGG - 57
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25199625
   Identification of male-specific amh duplication, sexually differentially expressed genes and microRNAs at early embryonic development of Nile tilapia (Oreochromis niloticus)
   Eshel O, Shirak A, Dor L, Band M, Zak T, Markovich-Gordon M, Chalifa-Caspi V, Feldmesser E, Weller JI, Seroussi E, Hulata G, Ron M
   BMC Genomics (2014) 15:774