Stem-loop oni-mir-10704

Accession

MI0035230

Description

Oreochromis niloticus oni-mir-10704 precursor miRNA

Sequence

155 reads, 0.0 reads per million, 60 experiments

AAGACUGAACAUGGAUAGUGGCuguugaaagagaugcUACGAUGUAUGUUCCUCUGCU
.(((..(((((((.((.(((((.(((......)))))))).)).))))))).)))...

Structure

--A   CU       G  A     u   ga 
   AGA  GAACAUG AU GUGGC guu  a
   |||  ||||||| || ||||| |||   
   UCU  CUUGUAU UA CAUcg uag  a
UCG   -C       G  G     -   ag 

Annotation confidence High

Genome context

CM001461.1: 4014250-4014307 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from oni-mir-10704

Mature oni-miR-10704-5p

• Accession: MIMAT0059644
• Description: Oreochromis niloticus oni-miR-10704-5p mature miRNA
• Sequence: 1 - AAGACUGAACAUGGAUAGUGGC - 22
• Evidence: experimental ; Illumina [1]

Mature oni-miR-10704-3p

• Accession: MIMAT0043205
• Description: Oreochromis niloticus oni-miR-10704-3p mature miRNA
• Sequence: 38 - UACGAUGUAUGUUCCUCUGCU - 58
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25199625
   Identification of male-specific amh duplication, sexually differentially expressed genes and microRNAs at early embryonic development of Nile tilapia (Oreochromis niloticus)
   Eshel O, Shirak A, Dor L, Band M, Zak T, Markovich-Gordon M, Chalifa-Caspi V, Feldmesser E, Weller JI, Seroussi E, Hulata G, Ron M
   BMC Genomics (2014) 15:774