Stem-loop oni-mir-10706

Accession

MI0035232

Description

Oreochromis niloticus oni-mir-10706 precursor miRNA

Sequence

1648 reads, 2.0 reads per million, 63 experiments

UGAGGGCUGCAUGGUGCUAACGccuuaacaagcuaaccgcgUUGACACCGUGCAGCCCUUGCU
.(((((((((((((((.((((((.(((......)))..)))))).)))))))))))))))...

Structure

--U               C      -c   ac 
   GAGGGCUGCAUGGUG UAACGc  uua  a
   ||||||||||||||| ||||||  |||   
   UUCCCGACGUGCCAC GUUgcg  aau  a
UCG               A      cc   cg 

Annotation confidence High

Genome context

CM001460.1: 29481638-29481700 [+]

Mature oni-miR-10706-5p

• Accession: MIMAT0043207
• Description: Oreochromis niloticus oni-miR-10706-5p mature miRNA
• Sequence: 1 - UGAGGGCUGCAUGGUGCUAACG - 22
• Evidence: experimental ; Illumina [1]

Mature oni-miR-10706-3p

• Accession: MIMAT0059646
• Description: Oreochromis niloticus oni-miR-10706-3p mature miRNA
• Sequence: 42 - UUGACACCGUGCAGCCCUUGCU - 63
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25199625
   Identification of male-specific amh duplication, sexually differentially expressed genes and microRNAs at early embryonic development of Nile tilapia (Oreochromis niloticus)
   Eshel O, Shirak A, Dor L, Band M, Zak T, Markovich-Gordon M, Chalifa-Caspi V, Feldmesser E, Weller JI, Seroussi E, Hulata G, Ron M
   BMC Genomics (2014) 15:774