Stem-loop oni-mir-10708

Accession

MI0035234

Description

Oreochromis niloticus oni-mir-10708 precursor miRNA

Sequence

2456 reads, 2.0 reads per million, 85 experiments

AGCCUGUUACACUACAUCAUACaauacaccacugucCUGCUGUUGUGUAAUGGGUUGC
((((((((((((.(((.((.(((.........)))..)).))).))))))))))))..

Structure

--            U   U  -U   aua 
  AGCCUGUUACAC ACA CA  ACa   c
  |||||||||||| ||| ||  |||   a
  UUGGGUAAUGUG UGU GU  ugu   c
CG            U   C  Cc   cac 

Annotation confidence High

Genome context

CM001447.1: 17748837-17748894 [+]

Mature oni-miR-10708-5p

• Accession: MIMAT0059648
• Description: Oreochromis niloticus oni-miR-10708-5p mature miRNA
• Sequence: 1 - AGCCUGUUACACUACAUCAUAC - 22
• Evidence: experimental ; Illumina [1]

Mature oni-miR-10708-3p

• Accession: MIMAT0043209
• Description: Oreochromis niloticus oni-miR-10708-3p mature miRNA
• Sequence: 37 - CUGCUGUUGUGUAAUGGGUUGC - 58
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25199625
   Identification of male-specific amh duplication, sexually differentially expressed genes and microRNAs at early embryonic development of Nile tilapia (Oreochromis niloticus)
   Eshel O, Shirak A, Dor L, Band M, Zak T, Markovich-Gordon M, Chalifa-Caspi V, Feldmesser E, Weller JI, Seroussi E, Hulata G, Ron M
   BMC Genomics (2014) 15:774