Stem-loop oni-mir-10716

Accession

MI0035242

Description

Oreochromis niloticus oni-mir-10716 precursor miRNA

Sequence

703 reads, 1.0 reads per million, 69 experiments

UGUUCUAGCUAAGUCCAGGCUUuguaaguucgcacggaagUCCGGACUUAGCGAAAACGCA
.(((...(((((((((.((((((((........)).)))))).)))))))))...)))...

Structure

--U   CUA         A      -  aag 
   GUU   GCUAAGUCC GGCUUu gu   u
   |||   ||||||||| |||||| ||    
   CAA   CGAUUCAGG CUgaag ca   u
ACG   AAG         C      g  cgc 

Annotation confidence High

Genome context

CM001459.1: 2341620-2341680 [-]

Mature oni-miR-10716-5p

• Accession: MIMAT0059651
• Description: Oreochromis niloticus oni-miR-10716-5p mature miRNA
• Sequence: 1 - UGUUCUAGCUAAGUCCAGGCUU - 22
• Evidence: experimental ; Illumina [1]

Mature oni-miR-10716-3p

• Accession: MIMAT0043217
• Description: Oreochromis niloticus oni-miR-10716-3p mature miRNA
• Sequence: 41 - UCCGGACUUAGCGAAAACGCA - 61
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25199625
   Identification of male-specific amh duplication, sexually differentially expressed genes and microRNAs at early embryonic development of Nile tilapia (Oreochromis niloticus)
   Eshel O, Shirak A, Dor L, Band M, Zak T, Markovich-Gordon M, Chalifa-Caspi V, Feldmesser E, Weller JI, Seroussi E, Hulata G, Ron M
   BMC Genomics (2014) 15:774