Stem-loop oni-mir-10717

Accession

MI0035243

Description

Oreochromis niloticus oni-mir-10717 precursor miRNA

Sequence

142 reads, 0.0 reads per million, 41 experiments

CACGGAUGCACACACAUGCACUuuguaugcaguucuaaaaGCGCAUGGUGUGCUCUGUCCaca
.(((((.((((((.(((((.((((.............)))).)))))))))))))))).....

Structure

----C     U      A     A    guaug 
     ACGGA GCACAC CAUGC CUuu     c
     ||||| |||||| ||||| ||||     a
     UGUCU CGUGUG GUACG Gaaa     g
acaCC     -      -     C    aucuu 

Annotation confidence Medium

Genome context

CM001460.1: 29094512-29094574 [-]

Mature oni-miR-10717-5p

• Accession: MIMAT0043218
• Description: Oreochromis niloticus oni-miR-10717-5p mature miRNA
• Sequence: 1 - CACGGAUGCACACACAUGCACU - 22
• Evidence: experimental ; Illumina [1]

Mature oni-miR-10717-3p

• Accession: MIMAT0059652
• Description: Oreochromis niloticus oni-miR-10717-3p mature miRNA
• Sequence: 41 - GCGCAUGGUGUGCUCUGUCC - 60
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25199625
   Identification of male-specific amh duplication, sexually differentially expressed genes and microRNAs at early embryonic development of Nile tilapia (Oreochromis niloticus)
   Eshel O, Shirak A, Dor L, Band M, Zak T, Markovich-Gordon M, Chalifa-Caspi V, Feldmesser E, Weller JI, Seroussi E, Hulata G, Ron M
   BMC Genomics (2014) 15:774