Stem-loop oni-mir-10594c

Accession

MI0035250

Description

Oreochromis niloticus oni-mir-10594c precursor miRNA

Sequence

521 reads, 6.0 reads per million, 69 experiments

UGACCCCUCCUGCACAGAGGGAguugugaacaugcacUUCUGUGUCGUUGGGUUUAGG
.(((((..(..(((((((((..((.........)).))))))))).)..)))))....

Structure

---U     CU CU         GA  ugu 
    GACCC  C  GCACAGAGG  gu   g
    |||||  |  |||||||||  ||   a
    UUGGG  G  UGUGUCUUc  cg   a
GGAU     UU -C         -a  uac 

Annotation confidence High

Genome context

GL832582.1: 3696-3753 [+]

Mature oni-miR-10594c-5p

• Accession: MIMAT0059656
• Description: Oreochromis niloticus oni-miR-10594c-5p mature miRNA
• Sequence: 1 - UGACCCCUCCUGCACAGAGGGA - 22
• Evidence: experimental ; Illumina [1]

Mature oni-miR-10594c-3p

• Accession: MIMAT0043224
• Description: Oreochromis niloticus oni-miR-10594c-3p mature miRNA
• Sequence: 38 - UUCUGUGUCGUUGGGUUUAGG - 58
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25199625
   Identification of male-specific amh duplication, sexually differentially expressed genes and microRNAs at early embryonic development of Nile tilapia (Oreochromis niloticus)
   Eshel O, Shirak A, Dor L, Band M, Zak T, Markovich-Gordon M, Chalifa-Caspi V, Feldmesser E, Weller JI, Seroussi E, Hulata G, Ron M
   BMC Genomics (2014) 15:774