Stem-loop oni-mir-10725

Accession

MI0035255

Description

Oreochromis niloticus oni-mir-10725 precursor miRNA

Sequence

2229 reads, 2.0 reads per million, 75 experiments

cuGAAUUAGUCAGCGCUGGUGAcgauugacgcucUUCAGGCGCUUUCUAGUUUAGU
(((((((((..((((((((.((((.....)).)).))).)))))..))))))))).

Structure

-         UC     -   U  -  a 
 cuGAAUUAG  AGCGC UGG GA cg u
 |||||||||  ||||| ||| || || u
 GAUUUGAUC  UCGCG ACU cu gc g
U         UU     G   U  c  a 

Annotation confidence High

Genome context

CM001448.1: 24304302-24304357 [+]

Mature oni-miR-10725-5p

• Accession: MIMAT0059659
• Description: Oreochromis niloticus oni-miR-10725-5p mature miRNA
• Sequence: 3 - GAAUUAGUCAGCGCUGGUGA - 22
• Evidence: experimental ; Illumina [1]

Mature oni-miR-10725-3p

• Accession: MIMAT0043229
• Description: Oreochromis niloticus oni-miR-10725-3p mature miRNA
• Sequence: 35 - UUCAGGCGCUUUCUAGUUUAGU - 56
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25199625
   Identification of male-specific amh duplication, sexually differentially expressed genes and microRNAs at early embryonic development of Nile tilapia (Oreochromis niloticus)
   Eshel O, Shirak A, Dor L, Band M, Zak T, Markovich-Gordon M, Chalifa-Caspi V, Feldmesser E, Weller JI, Seroussi E, Hulata G, Ron M
   BMC Genomics (2014) 15:774