miRBase entry: oni-mir-10726

Stem-loop oni-mir-10726


Accession
MI0035256
Description
Oreochromis niloticus oni-mir-10726 precursor miRNA


Sequence

318 reads, 1.0 reads per million, 74 experiments
CCUGGGACUGUUGUGGAGGCCCuuucuaauaagguugcggCCCUCCAUGACAGUCCCAACUC
..((((((((((((((((((((..(((....)))..).)).)))))))))))))))))....

Structure
--CC                 -  - uu   a 
    UGGGACUGUUGUGGAGG CC C  ucu a
    ||||||||||||||||| || |  |||  
    ACCCUGACAGUACCUCC gg g  gga u
CUCA                 C  c uu   a 


Annotation confidence High
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Genome context
CM001448.1: 19238516-19238577 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from oni-mir-10726
Name Accession Chromosome Start End Strand Confidence




Database links

Mature oni-miR-10726-5p

Accession MIMAT0043230
Description Oreochromis niloticus oni-miR-10726-5p mature miRNA
Sequence 1 - CCUGGGACUGUUGUGGAGGCCC - 22
Evidence experimental
Illumina [1]

Mature oni-miR-10726-3p

Accession MIMAT0059660
Description Oreochromis niloticus oni-miR-10726-3p mature miRNA
Sequence 41 - CCCUCCAUGACAGUCCCAACUC - 62
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25199625
    Identification of male-specific amh duplication, sexually differentially expressed genes and microRNAs at early embryonic development of Nile tilapia (Oreochromis niloticus)
    Eshel O, Shirak A, Dor L, Band M, Zak T, Markovich-Gordon M, Chalifa-Caspi V, Feldmesser E, Weller JI, Seroussi E, Hulata G, Ron M
    BMC Genomics (2014) 15:774