Stem-loop oni-mir-10727

Accession

MI0035257

Description

Oreochromis niloticus oni-mir-10727 precursor miRNA

Sequence

299 reads, 1.0 reads per million, 64 experiments

UUGGAAAUCUCUGAAUCCCUGCauuagccccgugacaggcugcAAGGAGUCAGAGAUUUCCAACU
((((((((((((((.(((.((((...(((........))))))).))).))))))))))))))..

Structure

--              A   C    uua   ccg 
  UUGGAAAUCUCUGA UCC UGCa   gcc   u
  |||||||||||||| ||| ||||   |||    
  AACCUUUAGAGACU AGG Acgu   cgg   g
UC              G   A    ---   aca 

Annotation confidence High

Genome context

CM001448.1: 27218157-27218221 [-]

Mature oni-miR-10727-5p

• Accession: MIMAT0059661
• Description: Oreochromis niloticus oni-miR-10727-5p mature miRNA
• Sequence: 1 - UUGGAAAUCUCUGAAUCCCUGC - 22
• Evidence: experimental ; Illumina [1]

Mature oni-miR-10727-3p

• Accession: MIMAT0043231
• Description: Oreochromis niloticus oni-miR-10727-3p mature miRNA
• Sequence: 44 - AAGGAGUCAGAGAUUUCCAACU - 65
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25199625
   Identification of male-specific amh duplication, sexually differentially expressed genes and microRNAs at early embryonic development of Nile tilapia (Oreochromis niloticus)
   Eshel O, Shirak A, Dor L, Band M, Zak T, Markovich-Gordon M, Chalifa-Caspi V, Feldmesser E, Weller JI, Seroussi E, Hulata G, Ron M
   BMC Genomics (2014) 15:774