Stem-loop oni-mir-10728

Accession

MI0035258

Description

Oreochromis niloticus oni-mir-10728 precursor miRNA

Sequence

971 reads, 6.0 reads per million, 36 experiments

ACUAGGCAGACCUGGCACACCUaaacauauugugagggUGCACCGGAAAUGCCUGGCAGA
.(((((((...((((..(((((..(((...)))..)))))..))))...)))))))....

Structure

---A       GAC    CA     aa   u 
    CUAGGCA   CUGG  CACCU  aca  
    |||||||   ||||  |||||  ||| a
    GGUCCGU   GGCC  GUggg  ugu  
AGAC       AAA    AC     ag   u 

Annotation confidence High

Genome context

CM001459.1: 25599763-25599822 [+]

Mature oni-miR-10728-5p

• Accession: MIMAT0043232
• Description: Oreochromis niloticus oni-miR-10728-5p mature miRNA
• Sequence: 1 - ACUAGGCAGACCUGGCACACCU - 22
• Evidence: experimental ; Illumina [1]

Mature oni-miR-10728-3p

• Accession: MIMAT0059662
• Description: Oreochromis niloticus oni-miR-10728-3p mature miRNA
• Sequence: 39 - UGCACCGGAAAUGCCUGGCAGA - 60
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25199625
   Identification of male-specific amh duplication, sexually differentially expressed genes and microRNAs at early embryonic development of Nile tilapia (Oreochromis niloticus)
   Eshel O, Shirak A, Dor L, Band M, Zak T, Markovich-Gordon M, Chalifa-Caspi V, Feldmesser E, Weller JI, Seroussi E, Hulata G, Ron M
   BMC Genomics (2014) 15:774