Stem-loop oni-mir-10733

Accession

MI0035263

Description

Oreochromis niloticus oni-mir-10733 precursor miRNA

Sequence

2343 reads, 7.0 reads per million, 65 experiments

GAGGUUUGAGUGUUUUGGUGGAaguaguuuuccuuuacUUCCCAGACUCUCAUUCCAGC
..((..((((.((((..(.((((((((.......))))))))))))).))))..))...

Structure

-GA  UU    U    UG U        uu 
   GG  UGAG GUUU  G GGAaguag  u
   ||  |||| ||||  | ||||||||  u
   CC  ACUC CAGA  C CCUUcauu  c
CGA  UU    U    -- -        uc 

Annotation confidence High

Genome context

CM001457.1: 26172149-26172207 [+]

Mature oni-miR-10733-5p

• Accession: MIMAT0059666
• Description: Oreochromis niloticus oni-miR-10733-5p mature miRNA
• Sequence: 1 - GAGGUUUGAGUGUUUUGGUGGA - 22
• Evidence: experimental ; Illumina [1]

Mature oni-miR-10733-3p

• Accession: MIMAT0043237
• Description: Oreochromis niloticus oni-miR-10733-3p mature miRNA
• Sequence: 39 - UUCCCAGACUCUCAUUCCAGC - 59
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25199625
   Identification of male-specific amh duplication, sexually differentially expressed genes and microRNAs at early embryonic development of Nile tilapia (Oreochromis niloticus)
   Eshel O, Shirak A, Dor L, Band M, Zak T, Markovich-Gordon M, Chalifa-Caspi V, Feldmesser E, Weller JI, Seroussi E, Hulata G, Ron M
   BMC Genomics (2014) 15:774