Stem-loop oni-mir-10738

Accession

MI0035269

Description

Oreochromis niloticus oni-mir-10738 precursor miRNA

Sequence

548 reads, 1.0 reads per million, 51 experiments

CGGGUGCUGCUGUCUGCUGUCgugucgcaccaccagagCAGCAAGCUGCAACACCUCACU
.(((((.(((.((.((((((..((.........))..)))))).)).))).)))))....

Structure

---C     C   U  C      Cg  ucg 
    GGGUG UGC GU UGCUGU  ug   c
    ||||| ||| || ||||||  ||   a
    UCCAC ACG CG ACGACg  ac   c
UCAC     A   U  A      ag  cac 

Annotation confidence High

Genome context

CM001465.1: 13312237-13312296 [+]

Mature oni-miR-10738-5p

• Accession: MIMAT0043243
• Description: Oreochromis niloticus oni-miR-10738-5p mature miRNA
• Sequence: 1 - CGGGUGCUGCUGUCUGCUGUC - 21
• Evidence: experimental ; Illumina [1]

Mature oni-miR-10738-3p

• Accession: MIMAT0059671
• Description: Oreochromis niloticus oni-miR-10738-3p mature miRNA
• Sequence: 39 - CAGCAAGCUGCAACACCUCACU - 60
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25199625
   Identification of male-specific amh duplication, sexually differentially expressed genes and microRNAs at early embryonic development of Nile tilapia (Oreochromis niloticus)
   Eshel O, Shirak A, Dor L, Band M, Zak T, Markovich-Gordon M, Chalifa-Caspi V, Feldmesser E, Weller JI, Seroussi E, Hulata G, Ron M
   BMC Genomics (2014) 15:774