Stem-loop oni-mir-219d-1

Accession

MI0035271

Description

Oreochromis niloticus oni-mir-219d-1 precursor miRNA

Sequence

agauguccauacacaauucuugggguugaauaugaguuuacucaAGAAUUGCGUUUGGACAAUCAGC
.((((((((.((.(((((((((((..(((((....)))))))))))))))).)).))))).)))...

Structure

--a   -     u  a           gu     a 
   gau gucca ac caauucuuggg  ugaau u
   ||| ||||| || |||||||||||  |||||  
   CUA CAGGU UG GUUAAGAacuc  auuug g
CGA   A     U  C           --     a 

Annotation confidence Not enough data

Genome context

CM001450.1: 22024211-22024277 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from oni-mir-219d-1

Mature oni-miR-219d

• Accession: MIMAT0043245
• Description: Oreochromis niloticus oni-miR-219d mature miRNA
• Sequence: 45 - AGAAUUGCGUUUGGACAAUCAGC - 67
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25199625
   Identification of male-specific amh duplication, sexually differentially expressed genes and microRNAs at early embryonic development of Nile tilapia (Oreochromis niloticus)
   Eshel O, Shirak A, Dor L, Band M, Zak T, Markovich-Gordon M, Chalifa-Caspi V, Feldmesser E, Weller JI, Seroussi E, Hulata G, Ron M
   BMC Genomics (2014) 15:774