Stem-loop oni-mir-10697b-2

Accession

MI0035288

Description

Oreochromis niloticus oni-mir-10697b-2 precursor miRNA

Sequence

699 reads, 5.0 reads per million, 72 experiments

GGCGGCCUCAGAAUCUCAUCUcugcuuuucuuagaugAUGUGGUUCUGUUGGCUUuagc
...((((.(((((((.((((((((.......)))).)))).)))))))..)))).....

Structure

--GGC    -U       U    -    cu 
     GGCC  CAGAAUC CAUC Ucug  u
     ||||  ||||||| |||| ||||  u
     UCGG  GUCUUGG GUAg agau  u
cgauU    UU       U    u    uc 

Annotation confidence Medium

Genome context

GL831501.1: 239612-239670 [+]

Mature oni-miR-10697b-5p

• Accession: MIMAT0043260
• Description: Oreochromis niloticus oni-miR-10697b-5p mature miRNA
• Sequence: 1 - GGCGGCCUCAGAAUCUCAUCU - 21
• Evidence: experimental ; Illumina [1]

Mature oni-miR-10697b-3p

• Accession: MIMAT0059680
• Description: Oreochromis niloticus oni-miR-10697b-3p mature miRNA
• Sequence: 38 - AUGUGGUUCUGUUGGCUU - 55
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25199625
   Identification of male-specific amh duplication, sexually differentially expressed genes and microRNAs at early embryonic development of Nile tilapia (Oreochromis niloticus)
   Eshel O, Shirak A, Dor L, Band M, Zak T, Markovich-Gordon M, Chalifa-Caspi V, Feldmesser E, Weller JI, Seroussi E, Hulata G, Ron M
   BMC Genomics (2014) 15:774