Stem-loop oni-mir-10761

Accession

MI0035297

Description

Oreochromis niloticus oni-mir-10761 precursor miRNA

Sequence

216 reads, 1.0 reads per million, 51 experiments

UUGAAUUUGUUCUUGUUGAAUCuugagacuuuaaauuuaauucaugguuaacuuuagaagaUGCAACAGGAUCAAAUUUGAaa
(((((((((.((((((((.((((......((((((.((((((...)))))).)))))))))).)))))))).)))))))))..

Structure

--         U        A    ugagac      u      c 
  UUGAAUUUG UCUUGUUG AUCu      uuuaaa uuaauu  
  ||||||||| |||||||| ||||      |||||| |||||| a
  AGUUUAAAC AGGACAAC Uaga      agauuu aauugg  
aa         U        G    ------      c      u 

Annotation confidence Medium

Genome context

CM001454.1: 14017498-14017580 [+]

Mature oni-miR-10761-5p

• Accession: MIMAT0043270
• Description: Oreochromis niloticus oni-miR-10761-5p mature miRNA
• Sequence: 1 - UUGAAUUUGUUCUUGUUGAAUC - 22
• Evidence: experimental ; Illumina [1]

Mature oni-miR-10761-3p

• Accession: MIMAT0059687
• Description: Oreochromis niloticus oni-miR-10761-3p mature miRNA
• Sequence: 62 - UGCAACAGGAUCAAAUUUGA - 81
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25199625
   Identification of male-specific amh duplication, sexually differentially expressed genes and microRNAs at early embryonic development of Nile tilapia (Oreochromis niloticus)
   Eshel O, Shirak A, Dor L, Band M, Zak T, Markovich-Gordon M, Chalifa-Caspi V, Feldmesser E, Weller JI, Seroussi E, Hulata G, Ron M
   BMC Genomics (2014) 15:774