Stem-loop oni-mir-10775

Accession

MI0035311

Description

Oreochromis niloticus oni-mir-10775 precursor miRNA

Sequence

234 reads, 0.0 reads per million, 38 experiments

CAGGAGCUCCGAUUGGCCAAGUgucaacucaugugggagguaauuguguaacagCUGGCCAAUCCUAGCCCCUGCU
((((.(((..(((((((((..(((..((.((..((.....))..)).)).)))..)))))))))..))).))))..

Structure

--    A   CC         AG   ca  u  ug  g 
  CAGG GCU  GAUUGGCCA  Ugu  ac ca  ug g
  |||| |||  |||||||||  |||  || ||  || a
  GUCC CGA  CUAACCGGU  aca  ug gu  au g
UC    C   UC         Cg   -a  u  ua  g 

Annotation confidence High

Genome context

CM001452.1: 18112159-18112234 [+]

Mature oni-miR-10775-5p

• Accession: MIMAT0043284
• Description: Oreochromis niloticus oni-miR-10775-5p mature miRNA
• Sequence: 1 - CAGGAGCUCCGAUUGGCCAAGU - 22
• Evidence: experimental ; Illumina [1]

Mature oni-miR-10775-3p

• Accession: MIMAT0059691
• Description: Oreochromis niloticus oni-miR-10775-3p mature miRNA
• Sequence: 55 - CUGGCCAAUCCUAGCCCCUGCU - 76
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25199625
   Identification of male-specific amh duplication, sexually differentially expressed genes and microRNAs at early embryonic development of Nile tilapia (Oreochromis niloticus)
   Eshel O, Shirak A, Dor L, Band M, Zak T, Markovich-Gordon M, Chalifa-Caspi V, Feldmesser E, Weller JI, Seroussi E, Hulata G, Ron M
   BMC Genomics (2014) 15:774