Stem-loop oni-mir-10783

Accession

MI0035319

Description

Oreochromis niloticus oni-mir-10783 precursor miRNA

Sequence

459 reads, 1.0 reads per million, 68 experiments

GACCUUCAGCUGUCAGCGUGCCGguuuuaauuaucucuGCCGUUGAUGUCUGCAAGUCUC
(((...(((.((((((((.((.(((.......)))...)))))))))).)))...)))..

Structure

--   CUU   C        U  --C   uu 
  GAC   CAG UGUCAGCG GC   Ggu  u
  |||   ||| |||||||| ||   |||  a
  CUG   GUC GUAGUUGC CG   cua  a
CU   AAC   U        -  ucu   uu 

Annotation confidence High

Genome context

CM001450.1: 1759452-1759511 [+]

Mature oni-miR-10783-5p

• Accession: MIMAT0059695
• Description: Oreochromis niloticus oni-miR-10783-5p mature miRNA
• Sequence: 1 - GACCUUCAGCUGUCAGCGUGCCG - 23
• Evidence: experimental ; Illumina [1]

Mature oni-miR-10783-3p

• Accession: MIMAT0043292
• Description: Oreochromis niloticus oni-miR-10783-3p mature miRNA
• Sequence: 39 - GCCGUUGAUGUCUGCAAGUCUC - 60
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25199625
   Identification of male-specific amh duplication, sexually differentially expressed genes and microRNAs at early embryonic development of Nile tilapia (Oreochromis niloticus)
   Eshel O, Shirak A, Dor L, Band M, Zak T, Markovich-Gordon M, Chalifa-Caspi V, Feldmesser E, Weller JI, Seroussi E, Hulata G, Ron M
   BMC Genomics (2014) 15:774