Stem-loop oni-mir-10795

Accession

MI0035331

Description

Oreochromis niloticus oni-mir-10795 precursor miRNA

Sequence

1596 reads, 2.0 reads per million, 89 experiments

CGUCCUCUGCUGCUGCUUCUUCacacagaucuugugaAGAAGAGUCACGCUGAGAGGAAACA
..((((((((((((.((((((((((.......)))))))))))).)).))..))))))....

Structure

--CG      --  -  -  G          ca 
    UCCUCU  GC UG CU CUUCUUCaca  g
    ||||||  || || || ||||||||||  a
    AGGAGA  CG AC GA GAAGAagugu  u
ACAA      GU  C  U  -          uc 

Annotation confidence Medium

Genome context

CM001454.1: 27904245-27904306 [+]

Mature oni-miR-10795-5p

• Accession: MIMAT0059698
• Description: Oreochromis niloticus oni-miR-10795-5p mature miRNA
• Sequence: 1 - CGUCCUCUGCUGCUGCUUCUUC - 22
• Evidence: experimental ; Illumina [1]

Mature oni-miR-10795-3p

• Accession: MIMAT0043304
• Description: Oreochromis niloticus oni-miR-10795-3p mature miRNA
• Sequence: 38 - AGAAGAGUCACGCUGAGAGGAAACA - 62
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25199625
   Identification of male-specific amh duplication, sexually differentially expressed genes and microRNAs at early embryonic development of Nile tilapia (Oreochromis niloticus)
   Eshel O, Shirak A, Dor L, Band M, Zak T, Markovich-Gordon M, Chalifa-Caspi V, Feldmesser E, Weller JI, Seroussi E, Hulata G, Ron M
   BMC Genomics (2014) 15:774