Stem-loop oni-mir-10796

Accession

MI0035332

Description

Oreochromis niloticus oni-mir-10796 precursor miRNA

Sequence

1422 reads, 2.0 reads per million, 75 experiments

UCGUGGCUGCUUUCCAAACCCUgcuuuucauaguauaaguggAAUUUGGCAAGUGCUACCAAGA
..(((((.((((.(((((..((((((..........))))))..))))).))))))))).....

Structure

---UC     U    U     CC      uuca 
     GUGGC GCUU CCAAA  CUgcuu    u
     ||||| |||| |||||  ||||||     
     CAUCG UGAA GGUUU  ggugaa    a
AGAAC     -    C     AA      uaug 

Annotation confidence High

Genome context

CM001459.1: 24922400-24922463 [+]

Mature oni-miR-10796-5p

• Accession: MIMAT0043305
• Description: Oreochromis niloticus oni-miR-10796-5p mature miRNA
• Sequence: 1 - UCGUGGCUGCUUUCCAAACCCU - 22
• Evidence: experimental ; Illumina [1]

Mature oni-miR-10796-3p

• Accession: MIMAT0059699
• Description: Oreochromis niloticus oni-miR-10796-3p mature miRNA
• Sequence: 43 - AAUUUGGCAAGUGCUACCAAGA - 64
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25199625
   Identification of male-specific amh duplication, sexually differentially expressed genes and microRNAs at early embryonic development of Nile tilapia (Oreochromis niloticus)
   Eshel O, Shirak A, Dor L, Band M, Zak T, Markovich-Gordon M, Chalifa-Caspi V, Feldmesser E, Weller JI, Seroussi E, Hulata G, Ron M
   BMC Genomics (2014) 15:774