Stem-loop oni-mir-10798

Accession

MI0035334

Description

Oreochromis niloticus oni-mir-10798 precursor miRNA

Sequence

1009 reads, 2.0 reads per million, 34 experiments

CCAUUUGUGCUUCUGAUGCAGUuuucacuuuauuugacacUGUACCAGUAUGCACAGGCGACa
.(.(((((((..(((.((((((..(((.......))).)))))).)))...))))))).)...

Structure

--C A       -UU   A      uu   cu 
   C UUUGUGC   CUG UGCAGU  uca  u
   | |||||||   ||| ||||||  |||  u
   G GGACACG   GAC AUGUca  agu  a
aCA C       UAU   C      -c   uu 

Annotation confidence High

Genome context

CM001446.1: 800448-800510 [+]

Mature oni-miR-10798-5p

• Accession: MIMAT0043307
• Description: Oreochromis niloticus oni-miR-10798-5p mature miRNA
• Sequence: 1 - CCAUUUGUGCUUCUGAUGCAGU - 22
• Evidence: experimental ; Illumina [1]

Mature oni-miR-10798-3p

• Accession: MIMAT0059700
• Description: Oreochromis niloticus oni-miR-10798-3p mature miRNA
• Sequence: 41 - UGUACCAGUAUGCACAGGCGAC - 62
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25199625
   Identification of male-specific amh duplication, sexually differentially expressed genes and microRNAs at early embryonic development of Nile tilapia (Oreochromis niloticus)
   Eshel O, Shirak A, Dor L, Band M, Zak T, Markovich-Gordon M, Chalifa-Caspi V, Feldmesser E, Weller JI, Seroussi E, Hulata G, Ron M
   BMC Genomics (2014) 15:774