Stem-loop oni-mir-10799

Accession

MI0035335

Description

Oreochromis niloticus oni-mir-10799 precursor miRNA

Sequence

758 reads, 1.0 reads per million, 81 experiments

AAAGGCAUUAUGGACAGACCUCACAuauuuugccucagUGUGGAUUCUAUAAUGUCUUGU
.(((((((((((((....((.(((.............))).))..)))))))))))))..

Structure

-A             CAGA  U   Auauu 
  AAGGCAUUAUGGA    CC CAC     u
  |||||||||||||    || |||     u
  UUCUGUAAUAUCU    GG GUg     g
UG             --UA  U   acucc 

Annotation confidence High

Genome context

GL831306.1: 476040-476099 [+]

Mature oni-miR-10799-5p

• Accession: MIMAT0043308
• Description: Oreochromis niloticus oni-miR-10799-5p mature miRNA
• Sequence: 1 - AAAGGCAUUAUGGACAGACCUCACA - 25
• Evidence: experimental ; Illumina [1]

Mature oni-miR-10799-3p

• Accession: MIMAT0059701
• Description: Oreochromis niloticus oni-miR-10799-3p mature miRNA
• Sequence: 39 - UGUGGAUUCUAUAAUGUCUUGU - 60
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25199625
   Identification of male-specific amh duplication, sexually differentially expressed genes and microRNAs at early embryonic development of Nile tilapia (Oreochromis niloticus)
   Eshel O, Shirak A, Dor L, Band M, Zak T, Markovich-Gordon M, Chalifa-Caspi V, Feldmesser E, Weller JI, Seroussi E, Hulata G, Ron M
   BMC Genomics (2014) 15:774