Stem-loop oni-mir-10800

Accession

MI0035336

Description

Oreochromis niloticus oni-mir-10800 precursor miRNA

Sequence

AAGGUGACAGUUGUUGUGGACAccuaccuuaaccccuuggugguucucacuccgguggccaucgcuaacugucaccaaga
..((((((((((((.((((.((((.(((..........)))((........)))))).)))).)).))))))))))....

Structure

--AA          -  U    A    -----------u   uuaa 
    GGUGACAGUU GU GUGG CAcc            acc    c
    |||||||||| || |||| ||||            |||     
    ccacugucaa cg uacc gugg            ugg    c
agaa          u  c    g    ccucacucuugg   uucc 

Annotation confidence Not enough data

Genome context

CM001460.1: 26030072-26030151 [+]

Mature oni-miR-10800

• Accession: MIMAT0043309
• Description: Oreochromis niloticus oni-miR-10800 mature miRNA
• Sequence: 1 - AAGGUGACAGUUGUUGUGGACA - 22
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25199625
   Identification of male-specific amh duplication, sexually differentially expressed genes and microRNAs at early embryonic development of Nile tilapia (Oreochromis niloticus)
   Eshel O, Shirak A, Dor L, Band M, Zak T, Markovich-Gordon M, Chalifa-Caspi V, Feldmesser E, Weller JI, Seroussi E, Hulata G, Ron M
   BMC Genomics (2014) 15:774