miRBase entry: oni-mir-10813-1

Stem-loop oni-mir-10813-1

Accession

MI0035350

Description

Oreochromis niloticus oni-mir-10813-1 precursor miRNA

Sequence

ACUGACACUCGGAUUAAGAUAagauggccuuuauuaucuuaucuuaauccgagugucagucuga
(((((((((((((((((((((((((((......)))))))))))))))))))))))))))....

Structure

----                           cc 
    ACUGACACUCGGAUUAAGAUAagaugg  u
    |||||||||||||||||||||||||||   
    ugacugugagccuaauucuauucuauu  u
aguc                           au

Annotation confidence Not enough data

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Genome context

CM001457.1: 28429777-28429840 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from oni-mir-10813-1

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature oni-miR-10813

Accession	MIMAT0043323
Description	Oreochromis niloticus oni-miR-10813 mature miRNA
Sequence	1 - ACUGACACUCGGAUUAAGAUA - 21
Evidence	experimental Illumina [1]

References

PubMed ID: 25199625
Identification of male-specific amh duplication, sexually differentially expressed genes and microRNAs at early embryonic development of Nile tilapia (Oreochromis niloticus)
Eshel O, Shirak A, Dor L, Band M, Zak T, Markovich-Gordon M, Chalifa-Caspi V, Feldmesser E, Weller JI, Seroussi E, Hulata G, Ron M
BMC Genomics (2014) 15:774