Stem-loop oni-mir-10817

Accession

MI0035356

Description

Oreochromis niloticus oni-mir-10817 precursor miRNA

Sequence

90 reads, 0.0 reads per million, 37 experiments

GAAAUGCUAUCAAAGAGAACUUcagguuauguauauaaccCUAGUUCUCUGGAGUAGCAUUAGU
..((((((((...((((((((...((((((....))))))..))))))))...))))))))...

Structure

-GA        CAA        Uca      g 
   AAUGCUAU   AGAGAACU   gguuau u
   ||||||||   ||||||||   ||||||  
   UUACGAUG   UCUCUUGA   ccaaua a
UGA        AGG        -UC      u 

Annotation confidence High

Genome context

GL831697.1: 151967-152030 [-]

Mature oni-miR-10817-5p

• Accession: MIMAT0059705
• Description: Oreochromis niloticus oni-miR-10817-5p mature miRNA
• Sequence: 1 - GAAAUGCUAUCAAAGAGAACUU - 22
• Evidence: experimental ; Illumina [1]

Mature oni-miR-10817-3p

• Accession: MIMAT0043328
• Description: Oreochromis niloticus oni-miR-10817-3p mature miRNA
• Sequence: 41 - CUAGUUCUCUGGAGUAGCAUUAGU - 64
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25199625
   Identification of male-specific amh duplication, sexually differentially expressed genes and microRNAs at early embryonic development of Nile tilapia (Oreochromis niloticus)
   Eshel O, Shirak A, Dor L, Band M, Zak T, Markovich-Gordon M, Chalifa-Caspi V, Feldmesser E, Weller JI, Seroussi E, Hulata G, Ron M
   BMC Genomics (2014) 15:774