Stem-loop oni-mir-10822

Accession

MI0035361

Description

Oreochromis niloticus oni-mir-10822 precursor miRNA

Sequence

570 reads, 1.0 reads per million, 66 experiments

cUGCGCAGCCUGUGUGUUCACCaauccucuggagguggUGAAAACACGUCUGCAGCUACA
..((((((..(((((.(((((((.(((...)))..))))))).))))).)))).))....

Structure

--cU  -    CC     G       -a   u 
    GC GCAG  UGUGU UUCACCa  ucc  
    || ||||  ||||| |||||||  ||| c
    CG CGUC  GCACA AAGUggu  agg  
ACAU  A    -U     A       gg   u 

Annotation confidence High

Genome context

CM001448.1: 19513861-19513920 [+]

Mature oni-miR-10822-5p

• Accession: MIMAT0059708
• Description: Oreochromis niloticus oni-miR-10822-5p mature miRNA
• Sequence: 2 - UGCGCAGCCUGUGUGUUCACC - 22
• Evidence: experimental ; Illumina [1]

Mature oni-miR-10822-3p

• Accession: MIMAT0043333
• Description: Oreochromis niloticus oni-miR-10822-3p mature miRNA
• Sequence: 39 - UGAAAACACGUCUGCAGCUACA - 60
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25199625
   Identification of male-specific amh duplication, sexually differentially expressed genes and microRNAs at early embryonic development of Nile tilapia (Oreochromis niloticus)
   Eshel O, Shirak A, Dor L, Band M, Zak T, Markovich-Gordon M, Chalifa-Caspi V, Feldmesser E, Weller JI, Seroussi E, Hulata G, Ron M
   BMC Genomics (2014) 15:774