Stem-loop oni-mir-124b-1

Accession

MI0035366

Description

Oreochromis niloticus oni-mir-124b-1 precursor miRNA

Literature search

1 open access papers mention oni-mir-124b-1
(1 sentences)

Sequence

18737 reads, 28.0 reads per million, 59 experiments

CAUUCACCGCGUGCCUUAAuuguaagacauuaaaUCAAGGUCCGCUGUGAACACG
..(((((.(((.(((((.(((...........))).))))).))).)))))....

Structure

--CA     C   U     A   guaa 
    UUCAC GCG GCCUU Auu    g
    ||||| ||| ||||| |||    a
    AAGUG CGC UGGAA Uaa    c
GCAC     U   C     C   auua 

Annotation confidence High

Genome context

CM001452.1: 10547290-10547344 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from oni-mir-124b-1

Mature oni-miR-124b-5p

• Accession: MIMAT0059711
• Description: Oreochromis niloticus oni-miR-124b-5p mature miRNA
• Sequence: 1 - CAUUCACCGCGUGCCUUAA - 19
• Evidence: experimental ; Illumina [1]

Mature oni-miR-124b-3p

• Accession: MIMAT0043338
• Description: Oreochromis niloticus oni-miR-124b-3p mature miRNA
• Sequence: 35 - UCAAGGUCCGCUGUGAACACG - 55
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25199625
   Identification of male-specific amh duplication, sexually differentially expressed genes and microRNAs at early embryonic development of Nile tilapia (Oreochromis niloticus)
   Eshel O, Shirak A, Dor L, Band M, Zak T, Markovich-Gordon M, Chalifa-Caspi V, Feldmesser E, Weller JI, Seroussi E, Hulata G, Ron M
   BMC Genomics (2014) 15:774