miRBase entry: oni-mir-10829

Stem-loop oni-mir-10829

Accession

MI0035371

Description

Oreochromis niloticus oni-mir-10829 precursor miRNA

Sequence

ugcugcgcgcaucaggggcuggaguggaguggauagcuucUAGGCCCGUGCAGCGCGGUCGGA
.(((((((((((..(((.(((((((..........)).))))).))))))).)))))))....

Structure

---u       -    ca   g     -  ggag 
    gcugcgc gcau  ggg cugga gu    u
    ||||||| ||||  ||| ||||| ||     
    UGGCGCG CGUG  CCC GAUcu cg    g
AGGC       A    --   G     u  auag

Annotation confidence Not enough data

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Genome context

CM001462.1: 1724377-1724439 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from oni-mir-10829

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature oni-miR-10829

Accession	MIMAT0043342
Description	Oreochromis niloticus oni-miR-10829 mature miRNA
Sequence	41 - UAGGCCCGUGCAGCGCGGUCGGA - 63
Evidence	experimental Illumina [1]

References

PubMed ID: 25199625
Identification of male-specific amh duplication, sexually differentially expressed genes and microRNAs at early embryonic development of Nile tilapia (Oreochromis niloticus)
Eshel O, Shirak A, Dor L, Band M, Zak T, Markovich-Gordon M, Chalifa-Caspi V, Feldmesser E, Weller JI, Seroussi E, Hulata G, Ron M
BMC Genomics (2014) 15:774