Stem-loop oni-mir-10573c

Accession

MI0035375

Description

Oreochromis niloticus oni-mir-10573c precursor miRNA

Sequence

21392 reads, 19.0 reads per million, 106 experiments

AACUCCAGUCCUCGAAGGCCGGugucaugcaucuuuucCAUGCCCUCGAGGACUGGcguuugaga
(((.(((((((((((.(((.(((((...)))))........))).))))))))))).))).....

Structure

-----   U           A   -------C     c 
     AAC CCAGUCCUCGA GGC        GGugu  
     ||| ||||||||||| |||        ||||| a
     uug GGUCAGGAGCU CCG        cuacg  
agagu   c           C   UACcuuuu     u 

Annotation confidence High

Genome context

GL831254.1: 1820820-1820884 [+]

Mature oni-miR-10573c-5p

• Accession: MIMAT0043346
• Description: Oreochromis niloticus oni-miR-10573c-5p mature miRNA
• Sequence: 1 - AACUCCAGUCCUCGAAGGCCGG - 22
• Evidence: experimental ; Illumina [1]

Mature oni-miR-10573c-3p

• Accession: MIMAT0059715
• Description: Oreochromis niloticus oni-miR-10573c-3p mature miRNA
• Sequence: 39 - CAUGCCCUCGAGGACUGG - 56
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25199625
   Identification of male-specific amh duplication, sexually differentially expressed genes and microRNAs at early embryonic development of Nile tilapia (Oreochromis niloticus)
   Eshel O, Shirak A, Dor L, Band M, Zak T, Markovich-Gordon M, Chalifa-Caspi V, Feldmesser E, Weller JI, Seroussi E, Hulata G, Ron M
   BMC Genomics (2014) 15:774