Stem-loop oni-mir-10841-1

Accession

MI0035385

Description

Oreochromis niloticus oni-mir-10841-1 precursor miRNA

Sequence

2864 reads, 3.0 reads per million, 100 experiments

CUGUAUUGAUUCCUUUGCUAAGacaaauaaauccuuAGCAAAGGAAUCAAUACAGCACG
((((((((((((((((((((((...........))))))))))))))))))))))....

Structure

----                      acaa 
    CUGUAUUGAUUCCUUUGCUAAG    a
    ||||||||||||||||||||||    u
    GACAUAACUAAGGAAACGAuuc    a
GCAC                      cuaa 

Annotation confidence High

Genome context

CM001450.1: 9772300-9772358 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from oni-mir-10841-1

Mature oni-miR-10841-5p

• Accession: MIMAT0059718
• Description: Oreochromis niloticus oni-miR-10841-5p mature miRNA
• Sequence: 1 - CUGUAUUGAUUCCUUUGCUAAG - 22
• Evidence: experimental ; Illumina [1]

Mature oni-miR-10841-3p

• Accession: MIMAT0043355
• Description: Oreochromis niloticus oni-miR-10841-3p mature miRNA
• Sequence: 37 - AGCAAAGGAAUCAAUACAGCACG - 59
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25199625
   Identification of male-specific amh duplication, sexually differentially expressed genes and microRNAs at early embryonic development of Nile tilapia (Oreochromis niloticus)
   Eshel O, Shirak A, Dor L, Band M, Zak T, Markovich-Gordon M, Chalifa-Caspi V, Feldmesser E, Weller JI, Seroussi E, Hulata G, Ron M
   BMC Genomics (2014) 15:774