Stem-loop oni-mir-10556b

Accession

MI0035388

Description

Oreochromis niloticus oni-mir-10556b precursor miRNA

Sequence

10433 reads, 36.0 reads per million, 104 experiments

aaagAAAAGCGUCUGGACUUCUUUaaguuannnnnnnnnnnnnnnnnnnnuaaAGAAGUCCAGACGCUUUU
....(((((((((((((((((((((.........................)))))))))))))))))))))

Structure

aaag                     aguuannnnnn 
    AAAAGCGUCUGGACUUCUUUa           n
    |||||||||||||||||||||           n
    UUUUCGCAGACCUGAAGAaau           n
----                     nnnnnnnnnnn 

Annotation confidence Medium

Genome context

Unknown

Mature oni-miR-10556b-5p

• Accession: MIMAT0043357
• Description: Oreochromis niloticus oni-miR-10556b-5p mature miRNA
• Sequence: 5 - AAAAGCGUCUGGACUUCUUU - 24
• Evidence: experimental ; Illumina [1]

Mature oni-miR-10556b-3p

• Accession: MIMAT0059719
• Description: Oreochromis niloticus oni-miR-10556b-3p mature miRNA
• Sequence: 54 - AGAAGUCCAGACGCUUUU - 71
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25199625
   Identification of male-specific amh duplication, sexually differentially expressed genes and microRNAs at early embryonic development of Nile tilapia (Oreochromis niloticus)
   Eshel O, Shirak A, Dor L, Band M, Zak T, Markovich-Gordon M, Chalifa-Caspi V, Feldmesser E, Weller JI, Seroussi E, Hulata G, Ron M
   BMC Genomics (2014) 15:774