Stem-loop oni-mir-10843

Accession

MI0035390

Description

Oreochromis niloticus oni-mir-10843 precursor miRNA

Sequence

1559 reads, 2.0 reads per million, 98 experiments

UUUCCCGAAGACAGAAGUAAAUaugacgcaugucuuUGUUUCUGUGUACGGGUUCAG
...((((.(.(((((((((((...(((....)))))))))))))).).)))).....

Structure

--UUU    A G           Uau   g 
     CCCG A ACAGAAGUAAA   gac c
     |||| | |||||||||||   |||  
     GGGC U UGUCUUUGUuu   cug a
GACUU    A G           ---   u 

Annotation confidence Medium

Genome context

CM001463.1: 6366420-6366476 [-]

Mature oni-miR-10843-5p

• Accession: MIMAT0043358
• Description: Oreochromis niloticus oni-miR-10843-5p mature miRNA
• Sequence: 1 - UUUCCCGAAGACAGAAGUAAAU - 22
• Evidence: experimental ; Illumina [1]

Mature oni-miR-10843-3p

• Accession: MIMAT0059720
• Description: Oreochromis niloticus oni-miR-10843-3p mature miRNA
• Sequence: 37 - UGUUUCUGUGUACGGGUUCAG - 57
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25199625
   Identification of male-specific amh duplication, sexually differentially expressed genes and microRNAs at early embryonic development of Nile tilapia (Oreochromis niloticus)
   Eshel O, Shirak A, Dor L, Band M, Zak T, Markovich-Gordon M, Chalifa-Caspi V, Feldmesser E, Weller JI, Seroussi E, Hulata G, Ron M
   BMC Genomics (2014) 15:774