Stem-loop oni-mir-10846-1

Accession

MI0035396

Description

Oreochromis niloticus oni-mir-10846-1 precursor miRNA

Sequence

136 reads, 0.0 reads per million, 43 experiments

CUGGGCUAUUACUCACAAACCuacaggUUUGUGAGUAAUAGCCCAGUUagacu
(((((((((((((((((((((....))))))))))))))))))))).......

Structure

-------                     u 
       CUGGGCUAUUACUCACAAACC a
       |||||||||||||||||||||  
       GACCCGAUAAUGAGUGUUUgg c
ucagaUU                     a 

Annotation confidence Medium

Genome context

CM001461.1: 16069646-16069698 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from oni-mir-10846-1

Mature oni-miR-10846-5p

• Accession: MIMAT0043363
• Description: Oreochromis niloticus oni-miR-10846-5p mature miRNA
• Sequence: 1 - CUGGGCUAUUACUCACAAACC - 21
• Evidence: experimental ; Illumina [1]

Mature oni-miR-10846-3p

• Accession: MIMAT0059722
• Description: Oreochromis niloticus oni-miR-10846-3p mature miRNA
• Sequence: 28 - UUUGUGAGUAAUAGCCCAGUU - 48
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25199625
   Identification of male-specific amh duplication, sexually differentially expressed genes and microRNAs at early embryonic development of Nile tilapia (Oreochromis niloticus)
   Eshel O, Shirak A, Dor L, Band M, Zak T, Markovich-Gordon M, Chalifa-Caspi V, Feldmesser E, Weller JI, Seroussi E, Hulata G, Ron M
   BMC Genomics (2014) 15:774