Stem-loop oni-mir-10847

Accession

MI0035397

Description

Oreochromis niloticus oni-mir-10847 precursor miRNA

Sequence

235 reads, 2.0 reads per million, 74 experiments

auGAGAAUGAUUGAUUGAUGUGgaugucaaggauuauuaaCACAUCAAUCAAUCAUUCUCguuu
((((((((((((((((((((((((((........))))..))))))))))))))))))))))..

Structure

--                      --    uca 
  auGAGAAUGAUUGAUUGAUGUG  gaug   a
  ||||||||||||||||||||||  ||||    
  ugCUCUUACUAACUAACUACAC  uuau   g
uu                      aa    uag 

Annotation confidence Medium

Genome context

CM001449.1: 1039798-1039861 [-]

Mature oni-miR-10847-5p

• Accession: MIMAT0043364
• Description: Oreochromis niloticus oni-miR-10847-5p mature miRNA
• Sequence: 3 - GAGAAUGAUUGAUUGAUGUG - 22
• Evidence: experimental ; Illumina [1]

Mature oni-miR-10847-3p

• Accession: MIMAT0059723
• Description: Oreochromis niloticus oni-miR-10847-3p mature miRNA
• Sequence: 41 - CACAUCAAUCAAUCAUUCUC - 60
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25199625
   Identification of male-specific amh duplication, sexually differentially expressed genes and microRNAs at early embryonic development of Nile tilapia (Oreochromis niloticus)
   Eshel O, Shirak A, Dor L, Band M, Zak T, Markovich-Gordon M, Chalifa-Caspi V, Feldmesser E, Weller JI, Seroussi E, Hulata G, Ron M
   BMC Genomics (2014) 15:774