Stem-loop oni-mir-3120-2

Accession

MI0035398

Description

Oreochromis niloticus oni-mir-3120-2 precursor miRNA

Sequence

153009 reads, 142.0 reads per million, 74 experiments

CUGUCUGUGCCUGCUGUAcaggagcagaaggucuGCACAGCAAGUGUAGACAGGC
((((((((((.((((((......(((((...))))))))))).))))))))))..

Structure

--          C      Acagga     a 
  CUGUCUGUGC UGCUGU      gcaga  
  |||||||||| ||||||      ||||| g
  GACAGAUGUG ACGACA      CGucu  
CG          A      ------     g 

Annotation confidence High

Genome context

CM001465.1: 13842409-13842463 [-]

Clustered miRNAs

3 other miRNAs are < 10 kb from oni-mir-3120-2

Mature oni-miR-3120-5p

• Accession: MIMAT0042835
• Description: Oreochromis niloticus oni-miR-3120-5p mature miRNA
• Sequence: 1 - CUGUCUGUGCCUGCUGUA - 18
• Evidence: experimental ; Illumina [2]

Mature oni-miR-3120-2-3p

• Accession: MIMAT0059505
• Description: Oreochromis niloticus oni-miR-3120-2-3p mature miRNA
• Sequence: 35 - GCACAGCAAGUGUAGACAGGC - 55
• Evidence: experimental ; Illumina [2]

References

1. PubMed ID: 25199625
   Identification of male-specific amh duplication, sexually differentially expressed genes and microRNAs at early embryonic development of Nile tilapia (Oreochromis niloticus)
   Eshel O, Shirak A, Dor L, Band M, Zak T, Markovich-Gordon M, Chalifa-Caspi V, Feldmesser E, Weller JI, Seroussi E, Hulata G, Ron M
   BMC Genomics (2014) 15:774