Stem-loop oni-mir-10569

Accession

MI0035403

Description

Oreochromis niloticus oni-mir-10569 precursor miRNA

Sequence

1508 reads, 4.0 reads per million, 73 experiments

AGGAGUUCUGUUCGGCGCCAGUcugaaggUGGGACCGAGCAGAACUCUGAC
.((((((((((((((..(((.(.....).)))..))))))))))))))...

Structure

--A              CG   G c 
   GGAGUUCUGUUCGG  CCA U u
   ||||||||||||||  ||| | g
   UCUCAAGACGAGCC  GGU g a
CAG              AG   g a 

Annotation confidence High

Genome context

CM001457.1: 33630011-33630061 [+]

Mature oni-miR-10569-5p

• Accession: MIMAT0059725
• Description: Oreochromis niloticus oni-miR-10569-5p mature miRNA
• Sequence: 1 - AGGAGUUCUGUUCGGCGCCAGU - 22
• Evidence: experimental ; Illumina [1]

Mature oni-miR-10569-3p

• Accession: MIMAT0043368
• Description: Oreochromis niloticus oni-miR-10569-3p mature miRNA
• Sequence: 30 - UGGGACCGAGCAGAACUCUGAC - 51
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25199625
   Identification of male-specific amh duplication, sexually differentially expressed genes and microRNAs at early embryonic development of Nile tilapia (Oreochromis niloticus)
   Eshel O, Shirak A, Dor L, Band M, Zak T, Markovich-Gordon M, Chalifa-Caspi V, Feldmesser E, Weller JI, Seroussi E, Hulata G, Ron M
   BMC Genomics (2014) 15:774