Stem-loop oni-mir-10547c

Accession

MI0035405

Description

Oreochromis niloticus oni-mir-10547c precursor miRNA

Sequence

757 reads, 1.0 reads per million, 87 experiments

UUGACUUUCUGCCCUGAUGGCGuguccguguucgUGCCACCGGGUGAGAAAGACGAc
(((.((((((..((((.(((((((........))))))).))))..)))))).))).

Structure

-   A      GC    A       ucc 
 UUG CUUUCU  CCUG UGGCGug   g
 ||| ||||||  |||| |||||||    
 AGC GAAAGA  GGGC ACCGUgc   u
c   A      GU    C       uug 

Annotation confidence High

Genome context

GL831468.1: 461860-461916 [-]

Mature oni-miR-10547c-5p

• Accession: MIMAT0043370
• Description: Oreochromis niloticus oni-miR-10547c-5p mature miRNA
• Sequence: 1 - UUGACUUUCUGCCCUGAUGGCG - 22
• Evidence: experimental ; Illumina [1]

Mature oni-miR-10547c-3p

• Accession: MIMAT0059727
• Description: Oreochromis niloticus oni-miR-10547c-3p mature miRNA
• Sequence: 35 - UGCCACCGGGUGAGAAAGACGA - 56
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25199625
   Identification of male-specific amh duplication, sexually differentially expressed genes and microRNAs at early embryonic development of Nile tilapia (Oreochromis niloticus)
   Eshel O, Shirak A, Dor L, Band M, Zak T, Markovich-Gordon M, Chalifa-Caspi V, Feldmesser E, Weller JI, Seroussi E, Hulata G, Ron M
   BMC Genomics (2014) 15:774